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HPC Workshop 2015
NOTE: This is an archived version of the content presented in the 2015 HPC workshop and may not represent the most up-to-date practices.
Day 1
Introduction to Tulane computing resources
Working on a remote Unix/Linux system
- SSH, terminal software
- Unix/Linux commands
- File Editing Software
- File transfer to/from your desktop/laptop
- Working on a remote Unix/Linux Cluster
- Module command
- How to submit a job
- Running interactive jobs (idev)
How to run a Matlab code on Cypress
How to run R code on Cypress
How to run Python Cypress
Day 2
Coding
Version control
Compilation, debugging, and optimization
- Makefiles
- Code Debugging
- Code Profiling
- gdb
- valgrind
- Intel Parallel Studio XE (Inspector, Advisor, and Vtune)
- Makefiles
- Code Debugging
- Code Profiling
- gdb
- valgrind
- Intel Parallel Studio XE (Inspector, Advisor, and Vtune)
Math Libraries
Intel’s Xeon Phi Coprocessor
Data Visualization
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