Available Software

'module command shows a list of available software and set-up environment variables.

Below are some of the software installed on Cypress and the link to their usage.

Programming:

• intel-psxe — Intel Parallel Studio: C/C++, Fortran compilers, Math Kernel Library (MKL), MPI library and Inspector XE, Advisor XE, and VTune™ Amplifier 2015
• Python — Run python script on Cypress.
• R — Run R on Cypress.
• Matlab — Run Matlab on Cypress.

Developers Tools:

• vi - Right weight screen editor.
• nano - Simple screen editor.
• emacs - Extensible, customizable text editor.
• svn - version control
• git - version control

Scientific Computing Libraries

• HDF5 — Hierarchical Data Format API Library.
• PETSc — Portable Extensible Toolkit for Scientific Computation.

General

• Gaussian - computational chemistry.
• STATA - statistical package.
• SAS - statistical package.

Utilities

• Singularity - A container platform.
• GNU Parallel - A Parallel Processing Tool.

Visualization

• VisIt - Open Source, interactive, scalable, visualization, animation and analysis tool.