Changes between Initial Version and Version 1 of cypress/glibc-version-problems


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Timestamp:
06/08/23 14:57:22 (12 months ago)
Author:
fuji
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  • cypress/glibc-version-problems

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     1[[PageOutline]]
     2= glibc version problems =
     3Compute nodes in partitions '''defq''' and '''interactive''' (as well as login nodes) have Centos version 6.5 with glibc version 2.12.
     4
     5When you try to run a pre-build software that is built on a newer operating system, you will encounter the error, for example,
     6
     7{{{
     8$ prefetch
     9./prefetch: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by ./prefetch)
     10}}}
     11
     12Since glibc version on Centos version 6.5 nodes is 2.12, GLIBC_2.14 isn't available. It is possible to run this software if you use the compute nodes in partition '''centos7''', which have Centos version 7.4 with glibc version 2.17. See [https://wiki.hpc.tulane.edu/trac/wiki/cypress/using#SelectingCentOSglibcVersionViaSLURMpartition here] for more details.
     13
     14See the alternate solution below if your software requires a glibc version greater than 2.17.
     15
     16== Work with Singularity Images ==
     17[https://sylabs.io/ Singularity] allows you to run an application built for a different distribution of Linux than Cypress OS (Centos 6 or 7). Here we run Rockylinux 9.2 on Cypress using Singularity.
     18
     19=== Run Singularity Images Interactively ===
     20
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