Changes between Version 3 and Version 4 of cypress/SingularityDockerhub


Ignore:
Timestamp:
06/17/24 10:49:00 (3 months ago)
Author:
fuji
Comment:

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  • cypress/SingularityDockerhub

    v3 v4  
    1919}}}
    2020
     21Singularity uses /tmp as a default temporary directory for building images. /tmp is just 2Gbyte so you might encounter errors because of no space on disk. In such case, you should set SINGULARITY_TMPDIR as, for example,
     22{{{
     23export SINGULARITY_TMPDIR=$TMPDIR
     24}}}
     25
     26
     27
    2128=== Example : [https://github.com/moshi4/FastDTLmapper FastDTLmapper] ===
    2229This tool depends on many python packages and requires both python2 and python3. Fortunately, the developer provides Docker Images so we can use it to generate a Singularity image.
    … …  
    2835}}}
    2936This command creates ‘fastdtlmapper_latest.sif’, which is the Singularity Image. You can rename/transfer it as you like.
     37
    3038
    3139To run it to show ‘help’,