Changes between Version 18 and Version 19 of cypress/Python

Timestamp:

08/24/16 21:05:24 (8 years ago)

Author:

fuji

Comment:

—

cypress/Python

@@ -4 +4 @@
 
 == Python Modules ==
-As of August 18th, 2015 there are three (3) versions of Python available on Cypress
-* Python 2.6.6 is loaded by default for al users
-* Python 2.7.8 is available as part of the Anaconda module
-* Python 2.7.10 is available as a stand alone module
-
-We currently do not have Python 3 installed on Cypress as we have had no requests for Python 3.
+As of August 25th, 2016 there are four versions of Python available on Cypress
+* Python 2.6.6 is available by default
+* Python 2.7.11 is available as part of the anaconda module
+* Python 3.5.1 is available as part of the anaconda3 module
+* Python 2.7.11 is available as a stand alone module
 
 === Anaconda ===
@@ -23 +22 @@
 
 ==== Install Packages to Anaconda Python ====
-If you want to use some package but Anaconda on CYpress doesn't have it, you can install it on your home directory.
+If you want to use some package but Anaconda on Cypress doesn't have it, you can install it on your home directory.
 See [[AnacondaInstallPackage|here]].
 
@@ -55 +54 @@
 Run Python in the command line window
 
-{{{
-[tulaneID@cypress01-035 pp-1.6.4]$ python
-Python 2.7.8 |Anaconda 2.1.0 (64-bit)| (default, Aug 21 2014, 18:22:21) 
-[GCC 4.4.7 20120313 (Red Hat 4.4.7-1)] on linux2
-Type "help", "copyright", "credits" or "license" for more information.
-Anaconda is brought to you by Continuum Analytics.
-Please check out: http://continuum.io/thanks and https://binstar.org
->>>
+{{{#!python
+[tulaneID@cypress01-035 pp-1.6.4]$ ipython
+Python 2.7.11 |Anaconda 2.5.0 (64-bit)| (default, Dec  6 2015, 18:08:32)
+Type "copyright", "credits" or "license" for more information.
+
+IPython 4.1.2 -- An enhanced Interactive Python.
+?         -> Introduction and overview of IPython's features.
+%quickref -> Quick reference.
+help      -> Python's own help system.
+object?   -> Details about 'object', use 'object??' for extra details.
+
+In [1]:
 }}}
 
@@ -82 +85 @@
 }}}
 
-== Running a Parallel Python Job ==
-
-The exact configuration of you parallel job script will depend on the flavor of parallelism that you choose for you Python script. 
-
-As an example we will use the Parallel Python (pp) package that we installed above. Parallel Python used the shared memory model of parallelism (analogous to to OpenMP). Let's run the [http://www.parallelpython.com/content/view/17/31/ sum of primes] example from the Parallel Python website. 
-
-We need to communicate the number of cores we wish to use to our script. The syntax here is
-
-{{{
-python sum_primes.py [ncpus]
-}}}
-
-We can communicate the SLURM parameters to the script using the appropriate SLURM environment variable.
-
-{{{#!bash
-#!/bin/bash
-#SBATCH --qos=normal            # Quality of Service
-#SBATCH --job-name=python       # Job Name
-#SBATCH --time=00:01:00         # WallTime
-#SBATCH --nodes=1               # Number of Nodes
-#SBATCH --ntasks-per-node=1     # Number of tasks (MPI processes)
-#SBATCH --cpus-per-task=15      # Number of threads per task (OMP threads)
-
-module load anaconda
-python sum_primes.py $SLURM_CPUS_PER_TASK
-}}}
 
 == Jupyter Notebook ==