Changes between Version 6 and Version 7 of cypress/GlobusInBarchJob

Timestamp:

09/21/2026 09:10:03 AM (4 hours ago)

Author:

fuji

Comment:

--

cypress/GlobusInBarchJob

@@ -1 +1 @@
 = Example Pipeline for Data Transfer Using Globus and Computation in Batch Jobs =
-Here we consider a pipeline to do the following processes.
+Here we consider a pipeline to perform the following processes.
 1. Transfer data files from Box to the Cypress Lustre directory.
 2. Perform computation using the data.
@@ -44 +44 @@
 For each transfer, the user must set whether to keep or delete the source directory. (see below)
 
-Note that the directory on Cypress must be set with write-access by '''~/.globusonline/lta/config-paths'''.
+Note that the directory on Cypress must be set with write access by '''~/.globusonline/lta/config-paths'''.
 
 === Data Transfer Script ===
@@ -99 +99 @@
 else
     SOURCE_EP=$MY_UUID:$CYPRESS_WORK_DIR
-    DEST_EP=$TULANE_BOX:$BOX_DATA_DIR    
+    DEST_EP=$TULANE_BOX:$BOX_RESULT_DIR    
 fi
 
-# Check logged in to Globus
+# Check if logged in to Globus
 output=$(globus whoami >/dev/null 2>&1)
 output_code=$?
@@ -114 +114 @@
 output_code=$?
 if [ $output_code -ne 0 ]; then
-    echo "ERROR!  The transfer of data in could not be started."
+    echo "ERROR!  The transfer of data could not be started."
     globusconnect -stop
     exit 1
 fi
 
-# wait util the task done.
+# wait until the task is done.
 output=$(globus task wait $task_id)
 output_code=$?
 if [ $output_code -ne 0 ]; then
-    echo "ERROR!  The transfer of data was failed."
+    echo "ERROR!  The transfer of data failed."
     globus task cancel $task_id
     globusconnect -stop
@@ -171 +171 @@
 exit 0
 }}}
-This is the main computing script, which the user has to edit. It doesn't have to use CentOS7 nodes.
+This is the main computing script the user must edit. It doesn't have to use CentOS7 nodes.
 
 
 == How to submit a job ==
-On login node, '''submitJob.sh''', '''transferData.sh''', and '''computing.sh''' must be in the same directory.
+On the login node, '''submitJob.sh''', '''transferData.sh''', and '''computing.sh''' must be in the same directory.
 {{{
 sh ./submitJob.sh