[[PageOutline]] = HPC Workshop 2018 = === 1. Introduction to Tulane computing resources === [https://crsc.tulane.edu/cypress-schematic/][[BR]] [https://crsc.tulane.edu/hardware-specifications/] === 2. Working on a remote !Unix/Linux system, Part I=== * [[cypress/SshUsage/|SSH, terminal software]] * [[cypress/BasicLinuxComands|Unix/Linux commands]] ''Break - Coffee & Refreshments Provided'' ---- === 3. Working on a remote !Unix/Linux system, Part II === * [[cypress/FileEditingSoftware|File Editing Software]] * [[cypress/FileTransfer|File transfer to/from your desktop/laptop]] * [[cypress/WorkingOnClusters|Working on a remote Unix/Linux Cluster]] === 4. Working on a remote !Unix/Linux system, Part III === * [[cypress/ModuleCommand|Module command]] * [[cypress/using#SubmittingJobsonCypress|How to submit a job]] ''Break - Lunch Provided'' ---- === 5. Serial, Parallel, Array, Interactive jobs === * [[cypress/using#MPIJobs Parallel Jobs : MPI]] * [[cypress/using#OpenMPJobs Parallel Jobs : OpenMP]] * [[cypress/using#HybridJobs Parallel Jobs : Hybrid Jobs]] * [[cypress/using#RunningMannySerialJobs : Job Arrays]] * [[cypress/using#SubmittingInteractiveJobs|Running interactive jobs (idev)]] === 6. How to run R code on Cypress === * [[cypress/R|Running R on Cypress]] * [[cypress/R#RunningRInteractively| Running R Interactively]] * [[cypress/R#RunningaRscriptinBatchmode|Running R with Batch Mode]] * [[cypress/R#InstallingRPackagesintouserhomedirectoryorlustresub-directory|Install Packages]] ''Afternoon Break'' ---- === 7. How to run Python Cypress=== * [[cypress/Python|Running Python on Cypress]] * [[cypress/Python#RunningPythonInteractively|Running Python Interactively]] * [[cypress/Python#RunningaPythonscriptinBatchmode|Running Python with Batch Mode]] * [[cypress/Python#JupyterNotebook|Jupyter Notebook]] * [[cypress/AnacondaInstallPackage|Install Packages to Anaconda Python]] Download Samples by: {{{svn co file:///home/fuji/repos/workshop ./workshop}}} Checkout Sample Programs onto local machine, (linux shell) {{{svn co svn+ssh://USERID@cypress1.tulane.edu/home/fuji/repos/workshop ./workshop}}}