[[PageOutline]]
= HPC Workshop 2017 =

=== 1. Introduction to Tulane computing resources ===
[https://crsc.tulane.edu/cypress-schematic/][[BR]]
[https://crsc.tulane.edu/hardware-specifications/]

=== 2. Working on a remote !Unix/Linux system, Part I===
* [[cypress/SshUsage/|SSH, terminal software]]
* [[cypress/BasicLinuxComands|Unix/Linux commands]]

''Break - Coffee & Refreshments Provided'' 

----

=== 3. Working on a remote !Unix/Linux system, Part II ===
* [[cypress/FileEditingSoftware|File Editing Software]]
* [[cypress/FileTransfer|File transfer to/from your desktop/laptop]]
* [[cypress/WorkingOnClusters|Working on a remote Unix/Linux Cluster]]

=== 4. Working on a remote !Unix/Linux system, Part III ===
* [[cypress/ModuleCommand|Module command]]
* [[cypress/using#SubmittingJobsonCypress|How to submit a job]]

''Break - Lunch Provided''

----

=== 5. Running interactive jobs ===
* [[cypress/using#SubmittingInteractiveJobs|Running interactive jobs (idev)]]

=== 6. How to run R code on Cypress ===
* [[cypress/R|Running R on Cypress]]
* [[cypress/R#RunningRInteractively| Running R Interactively]]
* [[cypress/R#RunningaRscriptinBatchmode|Running R with Batch Mode]]
* [[cypress/R#InstallingRPackagesintouserhomedirectoryorlustresub-directory|Install Packages]]


''Afternoon Break''

----

=== 7. How to run a Matlab code on Cypress ===
* [[cypress/Matlab#RunningMATLABinteractively|Running Matlab interactively using idev]]
* [[cypress/Matlab#RunningMATLABinabatchmode|Running Matlab jobs using SLURM scripts]]
* [[cypress/Matlab#RunningMATLABinParallelwithMultithreads|Parallel Matlab]]

=== 8. How to run Python Cypress===
* [[cypress/Python|Running Python on Cypress]]
* [[cypress/Python#RunningPythonInteractively|Running Python Interactively]]
* [[cypress/Python#RunningaPythonscriptinBatchmode|Running Python with Batch Mode]]
* [[cypress/Python#JupyterNotebook|Jupyter Notebook]]
* [[cypress/AnacondaInstallPackage|Install Packages to Anaconda Python]]

=== 9. Compiling C/C++/Fortran codes on Cypress ===
* [[cypress/CompilerUsage|Compiler Usage]]
* [[cypress/Programming| Programming/Job Scripts]]
 * [[cypress/Programming/Cexamples#ExamplesofJobscript|example]]
* Developers Tools
 * [[cypress/FileEditingSoftware| Editor]]
 * [[cypress/Programming/CodeDebugging|Code Debugging]]
 * Version Control
  * [[cypress/svn| version control by svn]]
  * [[cypress/git| version control by git]]

Download Samples by:

{{{svn co file:///home/fuji/repos/workshop ./workshop}}}

Checkout Sample Programs onto local machine, (Mac or linux)

{{{svn co svn+ssh://USERID@cypress1.tulane.edu/home/fuji/repos/workshop ./workshop}}}