Timeline



02/05/26:

16:34 cypress/RunningRStudioWithSingularity edited by Carl Baribault
Added tidyvverse alternative to bare RStudio (diff)
16:19 cypress/RunningRStudioWithSingularity edited by Carl Baribault
Fixed inconsistent node names (diff)
16:16 cypress/RunningRStudioWithSingularity edited by Carl Baribault
Reformatted, indented text (diff)
15:52 RStudioInBrowserEnded.png attached to cypress/RunningRStudioWithSingularity by Carl Baribault
RStudio in browser session ended
15:50 RStudioInBrowserRunning.png attached to cypress/RunningRStudioWithSingularity by Carl Baribault
RStudio interface in browser running
15:48 cypress/RunningRStudioWithSingularity edited by Carl Baribault
Added image links and caption info (diff)
14:56 RStudioInBrowserStartup.png attached to cypress/RunningRStudioWithSingularity by Carl Baribault
RStudio in browser starting up
14:50 cypress/RunningRStudioWithSingularity edited by Carl Baribault
Added content, Work In Progress (diff)

01/22/26:

12:05 Workshops/JobCheckpointing edited by Carl Baribault
Added multi-node benefit (diff)
11:37 Workshops/JobCheckpointing edited by Carl Baribault
Remoded message "under construction" (diff)
11:35 Workshops/JobCheckpointing/Examples edited by Carl Baribault
Removed under construction message (diff)
11:34 Workshops/JobCheckpointing/Examples edited by Carl Baribault
Filled in Python & R examples (diff)
11:08 Workshops/JobCheckpointing edited by Carl Baribault
Added detail to checkpointing process (diff)
10:31 Workshops/JobCheckpointing/SoftwareWithBuiltinCheckpointing edited by Carl Baribault
Added footnote & link for LONI clusters (diff)

01/21/26:

14:18 Workshops/JobCheckpointing/Examples created by Carl Baribault
Place holder
14:17 Workshops/JobCheckpointing/SoftwareWithBuiltinCheckpointing edited by Carl Baribault
Fixed table border (diff)
14:14 Workshops/JobCheckpointing/SoftwareWithBuiltinCheckpointing created by Carl Baribault
1st attempt
12:36 Workshops/JobCheckpointing edited by Carl Baribault
Moved "why…HPC" first, added links for software-with-built-in, … (diff)
11:53 Workshops/JobParallelism/WhileYourJobIsRunning edited by Carl Baribault
Escaped "—" cases and widened table (diff)

01/20/26:

16:19 Workshops/JobCheckpointing edited by Carl Baribault
Added cloud-based item (diff)
16:14 Workshops/JobCheckpointing edited by Carl Baribault
Added concepts section (diff)
13:48 Workshops/JobParallelism edited by Carl Baribault
Removed under construction (diff)
11:03 cypress/Singularity edited by Carl Baribault
Added consistent title for building elsewhere (diff)
10:52 cypress/Singularity edited by Carl Baribault
Added caveats for linux, architecture (diff)

01/19/26:

22:45 cypress/SingularityDockerhub edited by Carl Baribault
Updated R version to latest (diff)
22:42 cypress/SingularityRecipes edited by Carl Baribault
Added command to pull from Sylabs cloud (diff)
22:14 Workshops/HowToRunSingularityContainersOnCypress2025August edited by Carl Baribault
Added run item (diff)
22:03 Workshops/JobParallelism/AfterYourJobHasCompleted edited by Carl Baribault
Added ideal, actual, and summary (diff)
20:47 Workshops/JobParallelism/WhileYourJobIsRunning edited by Carl Baribault
multiple clarifications (diff)
14:06 Workshops/JobParallelism/AfterYourJobHasCompleted created by Carl Baribault
Setting up for sacct - WIP
13:51 Workshops/JobParallelism/WhileYourJobIsRunning edited by Carl Baribault
clarified subtitle "current" core efficiency (diff)
12:57 Workshops/JobParallelism/WhileYourJobIsRunning edited by Carl Baribault
simplified title (diff)
12:56 Workshops/JobParallelism edited by Carl Baribault
qualified titles for core efficiency (diff)
12:54 Workshops/JobParallelism/WhileYourJobIsRunning edited by Carl Baribault
(diff)
12:50 Workshops/JobParallelism/WhileYourJobIsRunning edited by Carl Baribault
added Example 3 case for unused node (diff)
12:45 cypress/R edited by Carl Baribault
Added subtitle for multiple nodes (diff)

01/18/26:

20:19 Workshops/JobParallelism edited by Carl Baribault
clarified page title "…while…running…" (diff)
20:17 Workshops/JobParallelism/WhileYourJobIsRunning edited by Carl Baribault
clarified page title (diff)
20:16 Workshops/JobParallelism/WhileYourJobIsRunning created by Carl Baribault
first iteration for the page
13:35 Workshops/JobParallelism edited by Carl Baribault
Subdivided content into pages for job stages (diff)
13:29 Workshops/JobParallelism/BeforeRunningYourJob created by Carl Baribault
New page: "Before running your job"
13:19 Workshops/JobParallelism edited by Carl Baribault
Added link for job time limits, etc. (diff)

01/17/26:

23:42 Workshops/JobParallelism edited by Carl Baribault
Iterated on section Before running… (diff)

01/16/26:

16:28 Workshops/JobParallelism edited by Carl Baribault
Added table for programming models, etc. - Work In Progress (diff)

01/15/26:

17:05 Workshops/JobParallelism edited by Carl Baribault
1st draft - Work In Progress (diff)
11:53 cypress/R edited by Carl Baribault
fixed on-page outline link (diff)
11:44 cypress/RunningRWithSingularity edited by Carl Baribault
clarified title (diff)

01/14/26:

16:50 Workshops/HowToRunPythonOnCypress2025August edited by fuji
(diff)
16:49 Workshops/HowToRunMatlab2025October edited by fuji
(diff)
16:27 cypress/RunningRWithSingularity edited by Carl Baribault
Added section for tidyverse, Seurat (diff)
14:14 cypress/Python edited by fuji
(diff)
14:13 cypress/Python edited by fuji
(diff)

01/13/26:

16:08 cypress/RunningRWithSingularity edited by Carl Baribault
Filled out content (diff)
13:00 cypress/R edited by Carl Baribault
Added link to CRAN page to parallelize R on SLURM (diff)
11:39 cypress/R edited by Carl Baribault
Added links to place holders for now (diff)
11:36 cypress/RunningRStudioWithSingularity created by Carl Baribault
Place holder
11:34 cypress/RunningRWithSingularity created by Carl Baribault
Place holder
11:27 Workshops/IntroToMulti-Processing2025August edited by fuji
(diff)
10:56 Workshops/IntroToMulti-Processing2025August edited by fuji
(diff)
10:55 Workshops/IntroToMulti-Processing2025August edited by fuji
(diff)
10:38 Workshops/IntroToMulti-Processing2025August edited by fuji
(diff)
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